Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'4-Segment pdb1qvg19.i101-106
Source: [PDB-id:chain] 1qvg:9 (&rarr PDB)
Source: Information STRUCTURE OF CCA OLIGONUCLEOTIDE BOUND TO THE TRNA BINDING SITES OF THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
Source: Compound 5S RIBOSOMAL RNA
Source: Resolution 2.90 ANGSTROMS.
Position (101, 106)
Primary structure ('_': anchors) _GAAA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 3 4
3 4 5
4 5 6
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters