Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Segment pdb1pnx1A.i692-700
Source: [PDB-id:chain] 1pnx:A (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF THE WILD TYPE RIBOSOME FROM E. COLI, 30S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNX, CONTAINS ONLY MOLECULES OF THE 30S RIBOSOMAL SUBUNIT. THE 50S SUBUNIT IS IN THE PDB FILE 1PNY.
Source: Compound 16S RIBOSOMAL RNA
Source: Resolution 9.50 ANGSTROMS.
Position (692, 700)
Primary structure ('_': anchors) _GCAGAUA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C4'-exo, 4: C2'-endo, 5: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 3 5
3 6 7
4 7 8
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters