Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-2-Internal Loop pdb1nbs1B.n64-73
Source: [PDB-id:chain] 1nbs:B (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P RNA
Source: Compound RIBONUCLEASE P RNA
Source: Resolution 3.15 ANGSTROMS.
Position (60, 76), (64, 73)
Primary structure ('_': anchors) _UAC_-_AU_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		3: C2'-endo, 7: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		7: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 2 3 ↑
3 3 6 &larr
4 4 5 ↑
5 7 9 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 2 7 Hoogsteen/Watson-Crick trans
3 5 6 Watson-Crick/Watson-Crick cis
4 7 9 Hoogsteen/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters