Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'4-4-Internal Loop pdb1na2FA.n11-19
Source: [PDB-id:chain] 1na2:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF THE P2B HAIRPIN FROM HUMAN TELOMERASE RNA
Source: Compound TELOMERASE RNA P2B HAIRPIN
FLIPPED INTERNAL
Source: Resolution NOT APPLICABLE.
Position (6, 24), (11, 19)
Primary structure ('_': anchors) _CUUU_-_UUUU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
4: C4'-exo, 6: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 4 5
3 5 6
4 7 8
5 8 9
6 10 11
7 11 12
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 12 Watson-Crick/Watson-Crick cis
2 2 11 Watson-Crick/Watson-Crick cis
3 3 10 Watson-Crick/Watson-Crick cis
4 4 9 Watson-Crick/Watson-Crick cis
5 6 7 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters