Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Segment pdb1n341A.i626-634
Source: [PDB-id:chain] 1n34:A (&rarr PDB)
Source: Information STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CODON AND CRYSTALLOGRAPHICALLY DISORDERED NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION
Source: Compound 16S RIBOSOMAL RNA
Source: Resolution 3.80 ANGSTROMS.
Position (626, 634)
Primary structure ('_': anchors) _AGGCUAG_
Bases with unusual sugar puckers
(Standard: C3'-endo)
6: C2'-endo, 7: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
7: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 3
2 3 4
3 4 5
4 5 6
5 8 9
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters