Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'2-1-Internal Loop pdb1m82FA.n8-17
Source: [PDB-id:chain] 1m82:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS
Source: Compound RNA (25-MER): THE COMPLEMENTARY RNA PROMOTER OF
FLIPPED INTERNAL
Source: Resolution NOT APPLICABLE.
Position (6, 20), (8, 17)
Primary structure ('_': anchors) _UU_-_A_
Bases with unusual sugar puckers
(Standard: C3'-endo)
1: C2'-exo, 3: C2'-endo, 5: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 1 6
3 3 4
4 5 6
5 6 7
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 7 Watson-Crick/Watson-Crick cis
2 2 6 Watson-Crick/Bifurcated cis y
3 4 5 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters