Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Segment pdb1l9a1B.i71-79
Source: [PDB-id:chain] 1l9a:B (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF SRP19 IN COMPLEX WITH THE S DOMAIN OF SIGNAL RECOGNITION PARTICLE RNA
Source: Compound SIGNAL RECOGNITION PARTICLE RNA S DOMAIN
Source: Resolution 2.90 ANGSTROMS.
Position (71, 79)
Primary structure ('_': anchors) _GAACCGG_
Bases with unusual sugar puckers
(Standard: C3'-endo)
None
Bases with unusual glycosidic-bond configuration
(Standard: anti)
3: syn, 4: syn, 8: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 4 5
2 5 6
3 7 8 &larr
4 8 9
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters