Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'4-Hairpin pdb1k4b1A.e5-10 | |||||||||||||
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Source: [PDB-id:chain] | 1k4b:A (&rarr PDB) | ||||||||||||
Source: Information | STRUCTURE OF AGUU RNA TETRALOOP, NMR, 20 STRUCTURES | ||||||||||||
Source: Compound | 5'-R(*GP*GP*UP*UP*CP*AP*GP*UP*UP*GP*AP*AP*CP*C)- | ||||||||||||
Source: Resolution | NOT APPLICABLE. | ||||||||||||
Position | (5, 10) | ||||||||||||
Primary structure ('_': anchors) | _AGUU_ | ||||||||||||
Bases with unusual sugar puckers (Standard: C3'-endo) |
1: C4'-exo, 3: C2'-endo, 4: C2'-endo, 5: C2'-endo, 6: C2'-exo | ||||||||||||
Bases with unusual glycosidic-bond configuration (Standard: anti) |
3: syn | ||||||||||||
Tertiary structure: Stacked bases |
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Tertiary structure: Base-pairs (anchor pairs) |
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Downloads |
Atom coordinates (PDB format) Contact annotation (MC-Annotate format) |
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3D Structure | Structure Graph | ||||||||||||
Structural Clusters |