Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'2-1-Internal Loop pdb1jj2F0.n2717-2769
Source: [PDB-id:chain] 1jj2:0 (&rarr PDB)
Source: Information FULLY REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
Source: Compound 23S RRNA
FLIPPED INTERNAL
Source: Resolution 2.40 ANGSTROMS.
Position (2719, 2767), (2721, 2764)
Primary structure ('_': anchors) _CA_-_A_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
2: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 3 4
2 5 6
3 6 7
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 7 Watson-Crick/Watson-Crick cis
2 3 6 Watson-Crick/Watson-Crick cis y
3 4 5 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters