Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-Hairpin pdb1ik11A.e5-9
Source: [PDB-id:chain] 1ik1:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF AN RNA HAIRPIN FROM HRV-14
Source: Compound 5'-R(*GP*GP*UP*AP*CP*UP*AP*UP*GP*UP*AP*CP*CP*A)-
Source: Resolution NOT APPLICABLE.
Position (5, 9)
Primary structure ('_': anchors) _UAU_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		2: C2'-endo, 3: C1'-exo, 4: C3'-exo, 5: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		4: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 3 5 →
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 5 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters