Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-1-Internal Loop pdb1iblFA.n900-1368
Source: [PDB-id:chain] 1ibl:A (&rarr PDB)
Source: Information STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCIN
Source: Compound 16S RIBOSOMAL RNA
FLIPPED INTERNAL
Source: Resolution 3.11 ANGSTROMS.
Position (906, 1362), (908, 1358)
Primary structure ('_': anchors) _UCC_-_C_
Bases with unusual sugar puckers
(Standard: C3'-endo)
7: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
7: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 3 4
3 6 8
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 8 Watson-Crick/Watson-Crick cis
2 2 6 Watson-Crick/O2' cis y
3 5 6 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters