Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Segment pdb1ibk1A.i1038-1046
Source: [PDB-id:chain] 1ibk:A (&rarr PDB)
Source: Information STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTIC PAROMOMYCIN
Source: Compound 16S RIBOSOMAL RNA
Source: Resolution 3.31 ANGSTROMS.
Position (1038, 1046)
Primary structure ('_': anchors) _GUCGUCA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
5: C2'-endo, 6: O4'-endo, 8: C3'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 3
2 4 5 &larr
3 5 7
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters