Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'14-Segment pdb1i971A.i537-552
Source: [PDB-id:chain] 1i97:A (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
Source: Compound 16S RRNA
Source: Resolution 4.50 ANGSTROMS.
Position (537, 552)
Primary structure ('_': anchors) _CGGAUUCACUGGGC_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		5: C4'-exo, 8: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		5: syn, 9: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 2 3 ↑
3 3 4 ↑
4 4 5 ↑
5 5 7 &larr
6 6 12 →
7 9 13 →
8 13 14 ↑
9 14 15 ↑
Tertiary structure: Base-pairs
(anchor pairs) 		None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters