Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'1-4-Internal Loop pdb1hq1FB.n1-49
Source: [PDB-id:chain] 1hq1:B (&rarr PDB)
Source: Information STRUCTURAL AND ENERGETIC ANALYSIS OF RNA RECOGNITION BY A UNIVERSALLY CONSERVED PROTEIN FROM THE SIGNAL RECOGNITION PARTICLE
Source: Compound 4.5S RNA DOMAIN IV
FLIPPED INTERNAL
Source: Resolution 1.52 ANGSTROMS.
Position (10, 40), (15, 38)
Primary structure ('_': anchors) _A_-_ACCA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
5: C2'-endo, 8: C2'-exo, 9: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 2 4
4 6 7
5 7 8
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 3 4 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters