Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'9-Hairpin pdb1h4s1T.e10-20
Source: [PDB-id:chain] 1h4s:T (&rarr PDB)
Source: Information PROLYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH TRNAPRO(CGG) AND A PROLYL-ADENYLATE ANALOGUE
Source: Compound TRNAPRO(CGG)
Source: Resolution 2.85 ANGSTROMS.
Position (10, 20)
Primary structure ('_': anchors) _AGCCCGGUA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		4: C3'-exo, 7: C3'-exo, 8: C3'-exo, 9: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		8: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 3 ↑
2 2 11 →
3 5 6 &larr
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 11 Watson-Crick/Watson-Crick cis
2 3 4 Bifurcated/O2' ?
3 8 9 Hoogsteen/Sugar cis y
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters