Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'1-1-Internal Loop pdb1foqFB.n21-89
Source: [PDB-id:chain] 1foq:B (&rarr PDB)
Source: Information PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA
Source: Compound BACTERIOPHAGE PHI29 PROHEAD RNA
FLIPPED INTERNAL
Source: Resolution 0.00 ANGSTROMS.
Position (19, 91), (21, 89)
Primary structure ('_': anchors) _G_-_U_
Bases with unusual sugar puckers
(Standard: C3'-endo)
None
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 5 6
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 6 Watson-Crick/Watson-Crick cis
2 3 4 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters