Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'5-Segment pdb1fmn1A.i23-29
Source: [PDB-id:chain] 1fmn:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF FMN-RNA APTAMER COMPLEX, NMR, 5 STRUCTURES
Source: Compound RNA (5'-R(*GP*GP*CP*GP*UP*GP*UP*AP*GP*GP
Source: Resolution NOT APPLICABLE.
Position (23, 29)
Primary structure ('_': anchors) _GAAGG_
Bases with unusual sugar puckers
(Standard: C3'-endo)
1: C4'-exo, 2: C2'-exo, 6: C2'-exo, 7: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 3 4
3 4 5
4 5 6
5 6 7
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters