Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'15-Segment pdb1ffk10.i271-287
Source: [PDB-id:chain] 1ffk:0 (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
Source: Compound 23S RRNA
Source: Resolution 2.40 ANGSTROMS.
Position (271, 287)
Primary structure ('_': anchors) _UCUCAUCAGCCGACC_
Bases with unusual sugar puckers
(Standard: C3'-endo)
5: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 6 7
3 7 8
4 9 10
5 10 11
6 11 12
7 12 13
8 14 15
9 15 16
10 16 17
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters