Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'4-1-Internal Loop pdb1ehtFA.n8-26
Source: [PDB-id:chain] 1eht:A (&rarr PDB)
Source: Information THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURES
Source: Compound THEOPHYLLINE-BINDING RNA
FLIPPED INTERNAL
Source: Resolution NOT APPLICABLE.
Position (9, 25), (11, 20)
Primary structure ('_': anchors) _CCUU_-_A_
Bases with unusual sugar puckers
(Standard: C3'-endo)
1: C2'-exo, 2: C2'-endo, 3: C2'-endo, 4: C2'-endo, 8: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 8
2 5 6
3 7 8
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 5 8 Watson-Crick/Watson-Crick cis y
3 6 7 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters