Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Hairpin pdb1e951A.e6-14
Source: [PDB-id:chain] 1e95:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF THE PSEUDOKNOT OF SRV-1 RNA, INVOLVED IN RIBOSOMAL FRAMESHIFTING
Source: Compound RNA (5'-(*GP*CP*GP*GP*CP*CP*AP*GP*CP*UP*CP*
Source: Resolution NOT APPLICABLE.
Position (6, 14)
Primary structure ('_': anchors) _AGCUCCA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 3 4
2 5 6
3 6 7
4 8 9
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters