Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Segment pdb1d6k1B.i26-34
Source: [PDB-id:chain] 1d6k:B (&rarr PDB)
Source: Information NMR SOLUTION STRUCTURE OF THE 5S RRNA E-LOOP/L25 COMPLEX
Source: Compound 5S RRNA E-LOOP (5SE)
Source: Resolution NOT APPLICABLE.
Position (26, 34)
Primary structure ('_': anchors) _GAGAGUA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C1'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 3 4
2 4 5
3 5 6
4 6 7
5 7 8
6 8 9
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters