Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'4-Hairpin pdb1d0t1A.e9-14
Source: [PDB-id:chain] 1d0t:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF A PHOSPHOROTHIOATE MODIFIED RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN
Source: Compound PHOSPHOROTHIOATE SUBSTITUTED PHAGE MS2 RNA
Source: Resolution NOT APPLICABLE.
Position (9, 14)
Primary structure ('_': anchors) _AUUA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C3'-exo, 4: C3'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 5 6
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 6 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters