Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'8-Hairpin pdb1cx01B.e19-28
Source: [PDB-id:chain] 1cx0:B (&rarr PDB)
Source: Information HEPATITIS DELTA VIRUS RIBOZYME
Source: Compound HDV RIBOZYME SELF-CLEAVED
Source: Resolution 2.30 ANGSTROMS.
Position (19, 28)
Primary structure ('_': anchors) _UCCUCGCU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C4'-exo, 4: C3'-exo, 6: C3'-exo, 9: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
7: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 3 4
3 7 10
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 10 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters