Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-3-Internal Loop pdb1c2w1B.n1478-1513
Source: [PDB-id:chain] 1c2w:B (&rarr PDB)
Source: Information 23S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION
Source: Compound 23S RIBOSOMAL RNA
Source: Resolution 7.50 ANGSTROMS.
Position (1474, 1517), (1478, 1513)
Primary structure ('_': anchors) _GUA_-_GAG_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		None
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		4: syn
Tertiary structure: Stacked bases None
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 10 Watson-Crick/Watson-Crick cis y
2 3 10 O2'/Watson-Crick ?
3 4 5 O2'/C ?
4 5 6 Watson-Crick/Watson-Crick cis y
5 5 8 Bifurcated/O2' ?
6 5 9 O2'/C ?
7 8 9 O2'/Sugar ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters