Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'6-Hairpin pdb1anr1A.e13-20
Source: [PDB-id:chain] 1anr:A (&rarr PDB)
Source: Information CIS-ACTING RNA REGULATORY ELEMENT (HIV-1 TAR), NMR, 20 STRUCTURES
Source: Compound RNA REGULATORY ELEMENT TAR
Source: Resolution NOT APPLICABLE.
Position (13, 20)
Primary structure ('_': anchors) _CUGGGA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		1: C2'-exo, 2: C4'-endo, 5: C3'-exo, 6: C2'-exo, 7: C3'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		2: syn
Tertiary structure: Stacked bases None
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 8 Watson-Crick/Watson-Crick cis y
2 3 5 Hoogsteen/O2' ?
3 4 6 Bifurcated/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters