Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-Segment pdb1a9l1A.i29-33
Source: [PDB-id:chain] 1a9l:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF A SUBSTRATE FOR THE ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES: THE BULGE-HELIX-BULGE MOTIF, NMR, 12 STRUCTURES
Source: Compound PRE-TRNA BULGE-HELIX-BULGE MOTIF
Source: Resolution NOT APPLICABLE.
Position (29, 33)
Primary structure ('_': anchors) _AUA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C4'-exo, 4: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 4 5
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 3 4 C/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters