Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Segment pdb1a511A.i4-12
Source: [PDB-id:chain] 1a51:A (&rarr PDB)
Source: Information LOOP D/LOOP E ARM OF E. COLI 5S RRNA, NMR, 9 STRUCTURES
Source: Compound 5S RRNA LOOP D/LOOP E
Source: Resolution NOT APPLICABLE.
Position (4, 12)
Primary structure ('_': anchors) _GAUGGUA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		3: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 3 4 ↑
3 4 5 ↑
4 5 6 ↑
5 6 7 ↑
6 7 8 ↑
7 8 9 ↑
Tertiary structure: Base-pairs
(anchor pairs) 		None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters