Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
| '4-Hairpin pdb1a1t1B.e8-13 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Source: [PDB-id:chain] | 1a1t:B (&rarr PDB) | ||||||||||||
| Source: Information | STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO THE SL3 PSI-RNA RECOGNITION ELEMENT, NMR, 25 STRUCTURES | ||||||||||||
| Source: Compound | SL3 STEM-LOOP RNA | ||||||||||||
| Source: Resolution | NOT APPLICABLE. | ||||||||||||
| Position | (8, 13) | ||||||||||||
| Primary structure ('_': anchors) | _GGAG_ | ||||||||||||
|
Bases with unusual sugar puckers (Standard: C3'-endo) |
1: O4'-exo, 2: O4'-exo, 3: C4'-endo, 4: C2'-endo, 5: O4'-endo, 6: C2'-exo | ||||||||||||
|
Bases with unusual glycosidic-bond configuration (Standard: anti) |
None | ||||||||||||
| Tertiary structure: Stacked bases | None | ||||||||||||
|
Tertiary structure: Base-pairs (anchor pairs) |
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| Downloads |
Atom coordinates (PDB format) Contact annotation (MC-Annotate format) |
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| 3D Structure | Structure Graph | ||||||||||||
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| Structural Clusters | |||||||||||||