Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(014)-Hairpin cluster 139 (cutoff=2.0 Å)
Cluster size 135 structure(s)
Representative structure 3cc2:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence SWBASARGGUGAVA
Cluster members
CAGAGAGGGUGAAA
1vsa:w, 343-358, 1vsp:w, 343-358, 1yl3:A, 342-357, 2b66:A, 342-357, 2b9n:A, 342-357, 2b9p:A, 342-357, 2hgq:A, 342-357, 2hgu:A, 342-357, 2j01:A, 331-346, 2j03:A, 331-346, 2jl6:A, 331-346, 2jl8:A, 331-346, 3d5b:A, 338-353, 3d5d:A, 338-353
CUCAGAAGGUGAGA
1j5a:A, 291-306, 1jzx:A, 291-306, 1jzy:A, 291-306, 1jzz:A, 291-306, 1k01:A, 291-306, 1njm:0, 289-304, 1njn:0, 289-304, 1njo:0, 289-304, 1njp:0, 289-304, 1nkw:0, 289-304, 1nwx:0, 289-304, 1nwy:0, 289-304, 1ond:0, 289-304, 1p9x:0, 289-304, 1pnu:0, 289-304, 1pny:0, 289-304, 1sm1:0, 289-304, 1vor:B, 289-304, 1vou:B, 289-304, 1vow:B, 289-304, 1voy:B, 289-304, 1vp0:B, 289-304, 1y69:0, 289-304, 2aar:0, 289-304, 2d3o:0, 289-304, 2o43:A, 289-304, 2o45:A, 289-304, 2ogm:0, 289-304, 2ogn:0, 289-304, 2ogo:0, 288-303, 2zjp:X, 279-294, 2zjq:X, 279-294, 2zjr:X, 279-294, 3cf5:X, 279-294, 3dll:X, 279-294
GAUACAGGGUGACA
1ffk:0, 316-331, 1jj2:0, 317-332, 1k73:A, 317-332, 1k8a:A, 317-332, 1k9m:A, 317-332, 1kc8:A, 317-332, 1kd1:A, 317-332, 1kqs:0, 317-332, 1m1k:A, 317-332, 1m90:A, 317-332, 1n8r:A, 317-332, 1nji:A, 317-332, 1q7y:A, 317-332, 1q81:A, 317-332, 1q82:A, 317-332, 1q86:A, 317-332, 1qvf:0, 317-332, 1qvg:0, 317-332, 1s1i:3, 316-331, 1s72:0, 317-332, 1vq4:0, 317-332, 1vq5:0, 317-332, 1vq6:0, 317-332, 1vq7:0, 317-332, 1vq8:0, 317-332, 1vq9:0, 317-332, 1vqk:0, 317-332, 1vql:0, 317-332, 1vqm:0, 317-332, 1vqn:0, 317-332, 1vqo:0, 317-332, 1vqp:0, 317-332, 1vs6:B, 318-333, 1vs8:B, 318-333, 1w2b:0, 317-332, 1yhq:0, 317-332, 1yi2:0, 317-332, 1yij:0, 317-332, 1yit:0, 317-332, 1yj9:0, 317-332, 1yjn:0, 317-332, 1yjw:0, 317-332, 2aw4:B, 318-333, 2awb:B, 318-333, 2gya:0, 269-284, 2i2t:B, 318-333, 2i2v:B, 318-333, 2j28:B, 318-333, 2otj:0, 317-332, 2otl:0, 317-332, 2qa4:0, 317-332, 2qam:B, 318-333, 2qao:B, 318-333, 2qba:B, 318-333, 2qbc:B, 318-333, 2qbe:B, 318-333, 2qbg:B, 318-333, 2qbi:B, 318-333, 2qbk:B, 318-333, 2qex:0, 317-332, 2qov:B, 318-333, 2qox:B, 318-333, 2qoz:B, 318-333, 2qp1:B, 318-333, 2vhm:B, 318-333, 2z4l:B, 318-333, 2z4n:B, 318-333, 3bbx:B, 318-333, 3cc2:0, 317-332, 3cc4:0, 317-332, 3cc7:0, 317-332, 3cce:0, 317-332, 3ccj:0, 317-332, 3ccl:0, 317-332, 3ccm:0, 317-332, 3ccq:0, 317-332, 3ccr:0, 317-332, 3ccs:0, 317-332, 3ccu:0, 317-332, 3ccv:0, 317-332, 3cd6:0, 317-332, 3cma:0, 317-332, 3cme:0, 317-332, 3cpw:0, 317-332, 3df2:B, 318-333, 3df4:B, 318-333