Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(013)-Hairpin cluster 77 (cutoff=1.5 Å)
Cluster size 100 structure(s)
Representative structure 1qvg:9 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence HCCCAUBCCGAAC
Cluster members
ACCCAUCCCGAAC
1ffk:9, 33-47, 1jj2:9, 33-47, 1k73:B, 33-47, 1k8a:B, 33-47, 1k9m:B, 33-47, 1kc8:B, 33-47, 1kd1:B, 33-47, 1kqs:9, 33-47, 1m1k:B, 33-47, 1m90:B, 33-47, 1n8r:B, 33-47, 1nji:B, 33-47, 1q7y:B, 33-47, 1q81:B, 33-47, 1q82:B, 33-47, 1q86:B, 33-47, 1qvf:9, 33-47, 1qvg:9, 33-47, 1s1i:4, 33-47, 1s72:9, 33-47, 1vq4:9, 33-47, 1vq5:9, 33-47, 1vq6:9, 33-47, 1vq7:9, 33-47, 1vq8:9, 33-47, 1vq9:9, 33-47, 1vqk:9, 33-47, 1vql:9, 33-47, 1vqm:9, 33-47, 1vqn:9, 33-47, 1vqo:9, 33-47, 1vqp:9, 33-47, 1w2b:9, 33-47, 1yhq:9, 33-47, 1yi2:9, 33-47, 1yij:9, 33-47, 1yit:9, 33-47, 1yj9:9, 33-47, 1yjn:9, 33-47, 1yjw:9, 33-47, 2otj:9, 33-47, 2otl:9, 33-47, 2qa4:9, 33-47, 2qex:9, 33-47, 3cc2:9, 33-47, 3cc4:9, 33-47, 3cc7:9, 33-47, 3cce:9, 33-47, 3ccj:9, 33-47, 3ccl:9, 33-47, 3ccm:9, 33-47, 3ccq:9, 33-47, 3ccr:9, 33-47, 3ccs:9, 33-47, 3ccu:9, 33-47, 3ccv:9, 33-47, 3cd6:9, 33-47, 3cma:9, 33-47, 3cme:9, 33-47, 3cpw:9, 33-47
CCCCAUGCCGAAC
1mji:C, 9-23, 1mji:D, 9-23, 1vs6:A, 33-47, 1vs8:A, 33-47, 2aw4:A, 33-47, 2awb:A, 33-47, 2i2t:A, 33-47, 2i2v:A, 33-47, 2j28:A, 33-47, 2qam:A, 33-47, 2qao:A, 33-47, 2qba:A, 33-47, 2qbc:A, 33-47, 2qbe:A, 33-47, 2qbg:A, 33-47, 2qbi:A, 33-47, 2qbk:A, 33-47, 2qov:A, 33-47, 2qox:A, 33-47, 2qoz:A, 33-47, 2qp1:A, 33-47, 2z4l:A, 33-47, 2z4n:A, 33-47, 2zjr:Y, 35-49, 3bbx:A, 33-47, 3df2:A, 33-47, 3df4:A, 33-47
UCCCAUUCCGAAC
1vsa:x, 34-48, 1vsp:x, 34-48, 2hgj:B, 36-50, 2hgq:B, 36-50, 2hgu:B, 36-50, 2j01:B, 34-48, 2j03:B, 34-48, 2jl6:B, 34-48, 2jl8:B, 34-48, 2v47:B, 34-48, 2v49:B, 34-48, 3d5b:B, 34-48, 3d5d:B, 34-48