Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(009)-Hairpin cluster 366 (cutoff=2.0 Å)
Cluster size 40 structure(s)
Representative structure 1y69:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence SDNDVHVVB
Cluster members
CGAGACGAG
3bbo:C, 11-21
GACGGAGAU
3bbo:A, 2242-2252
GGGUCUCCU
1n36:A, 814-824, 2v46:A, 814-824, 2v48:A, 814-824
GGUAAUGGC
1fka:A, 249-259
GUCGGACAU
2i2t:B, 2250-2260, 2i2v:B, 2250-2260, 2qam:B, 2250-2260, 2qao:B, 2250-2260, 2qba:B, 2250-2260, 2qbc:B, 2250-2260, 2qov:B, 2250-2260, 2qox:B, 2250-2260, 2qoz:B, 2250-2260, 2qp1:B, 2250-2260, 2vhm:B, 2250-2260, 2vhn:B, 2250-2260, 3df2:B, 2250-2260, 3df4:B, 2250-2260
GUUGGAAAU
1njm:0, 2195-2205, 1njn:0, 2195-2205, 1njo:0, 2195-2205, 1njp:0, 2195-2205, 1nkw:0, 2195-2205, 1nwx:0, 2195-2205, 1nwy:0, 2195-2205, 1ond:0, 2194-2204, 1p9x:0, 2170-2180, 1pnu:0, 2239-2249, 1pny:0, 2239-2249, 1xbp:0, 2195-2205, 1y69:0, 2195-2205, 2aar:0, 2195-2205, 2d3o:0, 2216-2226, 2o43:A, 2195-2205, 2o45:A, 2183-2193, 2ogn:0, 2195-2205, 3cf5:X, 2106-2116, 3dll:X, 2106-2116