Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(009)-Hairpin cluster 860 (cutoff=1.0 Å)
Cluster size 56 structure(s)
Representative structure 3deg:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence ABUDHHRAW
Cluster members
ACUGAAGAU
1ehz:A, 30-40, 1evv:A, 30-40, 1fcw:A, 30-40, 1fcw:B, 30-40, 1fcw:C, 30-40, 1fcw:D, 30-40, 1fcw:E, 30-40, 1gix:B, 30-40, 1gix:C, 30-40, 1i9v:A, 30-40, 1jgo:B, 30-40, 1jgo:C, 30-40, 1jgp:B, 30-40, 1jgp:C, 30-40, 1jgq:B, 30-40, 1jgq:C, 30-40, 1lu3:A, 5-15, 1mj1:C, 30-40, 1mj1:D, 30-40, 1ml5:B, 30-40, 1ob5:B, 30-40, 1ob5:D, 30-40, 1ob5:F, 30-40, 1pns:V, 30-40, 1pns:W, 30-40, 1sz1:E, 30-40, 1sz1:F, 30-40, 1tn2:A, 30-40, 1tra:A, 30-40, 1ttt:E, 30-40, 1ttt:F, 30-40, 1zo1:F, 30-40, 1zo3:A, 30-40, 1zo3:B, 30-40, 2b64:W, 30-40, 2b9m:W, 30-40, 2b9o:W, 30-40, 2gy9:U, 30-40, 2gy9:V, 30-40, 2gy9:W, 30-40, 2gyb:U, 30-40, 2gyb:V, 30-40, 2gyb:W, 30-40, 3deg:A, 30-40, 486d:A, 30-40, 4tna:A, 30-40, 4tra:A, 30-40, 6tna:A, 30-40
ACUUUUAAU
1fir:A, 30-40
AGUAACGAA
2rkj:C, 213-223, 2rkj:G, 213-223, 2rkj:K, 213-223, 2rkj:O, 213-223
AUUGAAAAU
2ow8:z, 30-40, 3bbv:z, 30-40
AUUGCAAAU
1b23:R, 29-39