Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(008)-Hairpin cluster 493 (cutoff=1.0 Å)
Cluster size 119 structure(s)
Representative structure 1yi2:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence GVYWABCU
Cluster members
GAUUACCU
1j5a:A, 58-67, 1jzx:A, 58-67, 1jzy:A, 58-67, 1jzz:A, 58-67, 1k01:A, 58-67, 1njn:0, 58-67, 1p9x:0, 58-67, 1pnu:0, 58-67, 1pny:0, 58-67, 1xbp:0, 58-67, 1y69:0, 58-67, 2aar:0, 58-67, 2d3o:0, 58-67, 2o45:A, 58-67, 2ogm:0, 58-67, 2ogn:0, 58-67, 2ogo:0, 57-66, 2zjp:X, 58-67, 2zjq:X, 58-67, 2zjr:X, 58-67, 3cf5:X, 58-67, 3dll:X, 58-67
GCCAAGCU
1ffk:0, 46-55, 1jj2:0, 46-55, 1k73:A, 46-55, 1k8a:A, 46-55, 1k9m:A, 46-55, 1kc8:A, 46-55, 1kd1:A, 46-55, 1kqs:0, 46-55, 1m1k:A, 46-55, 1m90:A, 46-55, 1n8r:A, 46-55, 1nji:A, 46-55, 1q7y:A, 46-55, 1q81:A, 46-55, 1q82:A, 46-55, 1q86:A, 46-55, 1qvf:0, 46-55, 1qvg:0, 46-55, 1s1i:3, 46-55, 1s72:0, 46-55, 1vq4:0, 46-55, 1vq5:0, 46-55, 1vq6:0, 46-55, 1vq7:0, 46-55, 1vq8:0, 46-55, 1vq9:0, 46-55, 1vqk:0, 46-55, 1vql:0, 46-55, 1vqm:0, 46-55, 1vqn:0, 46-55, 1vqo:0, 46-55, 1vqp:0, 46-55, 1w2b:0, 46-55, 1yhq:0, 46-55, 1yi2:0, 46-55, 1yij:0, 46-55, 1yit:0, 46-55, 1yj9:0, 46-55, 1yjn:0, 46-55, 1yjw:0, 46-55, 2otj:0, 46-55, 2otl:0, 46-55, 2qa4:0, 46-55, 2qex:0, 46-55, 3cc2:0, 46-55, 3cc4:0, 46-55, 3cc7:0, 46-55, 3cce:0, 46-55, 3ccj:0, 46-55, 3ccl:0, 46-55, 3ccm:0, 46-55, 3ccq:0, 46-55, 3ccr:0, 46-55, 3ccs:0, 46-55, 3ccu:0, 46-55, 3ccv:0, 46-55, 3cd6:0, 46-55, 3cma:0, 46-55, 3cme:0, 46-55, 3cpw:0, 46-55, 3dkn:D, 3-12
GCUAAUCU
1vs6:B, 59-68, 1vs8:B, 59-68, 2aw4:B, 59-68, 2awb:B, 59-68, 2gya:0, 43-52, 2gyc:0, 43-52, 2i2t:B, 59-68, 2i2v:B, 59-68, 2j28:B, 59-68, 2qam:B, 59-68, 2qao:B, 59-68, 2qba:B, 59-68, 2qbc:B, 59-68, 2qbe:B, 59-68, 2qbg:B, 59-68, 2qbi:B, 59-68, 2qbk:B, 59-68, 2qov:B, 59-68, 2qox:B, 59-68, 2qoz:B, 59-68, 2qp1:B, 59-68, 2vhm:B, 59-68, 2vhn:B, 59-68, 2z4l:B, 59-68, 2z4n:B, 59-68, 3bbx:B, 59-68, 3df2:B, 59-68, 3df4:B, 59-68
GGCUACCU
2j01:A, 53-62, 2j03:A, 53-62, 2jl6:A, 53-62, 2jl8:A, 53-62, 2v47:A, 53-62, 2v49:A, 53-62, 3d5b:A, 53-62, 3d5d:A, 53-62