Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(007)-Hairpin cluster 1225 (cutoff=1.0 Å)
Cluster size 111 structure(s)
Representative structure 2ogm:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence WASAKBA
Cluster members
AAGACCA
1j5a:A, 2715-2723, 1jzx:A, 2715-2723, 1jzy:A, 2715-2723, 1jzz:A, 2715-2723, 1k01:A, 2715-2723, 1njm:0, 2707-2715, 1njn:0, 2707-2715, 1njo:0, 2707-2715, 1njp:0, 2707-2715, 1nkw:0, 2707-2715, 1nwx:0, 2707-2715, 1nwy:0, 2707-2715, 1ond:0, 2706-2714, 1p9x:0, 2682-2690, 1pnu:0, 2751-2759, 1pny:0, 2751-2759, 1sm1:0, 2707-2715, 1xbp:0, 2707-2715, 1y69:0, 2707-2715, 1yl3:A, 2793-2801, 2aar:0, 2707-2715, 2b66:A, 2735-2743, 2b9n:A, 2735-2743, 2b9p:A, 2735-2743, 2d3o:0, 2728-2736, 2hgj:A, 2807-2815, 2hgq:A, 2807-2815, 2hgu:A, 2807-2815, 2j01:A, 2695-2703, 2j03:A, 2695-2703, 2jl6:A, 2774-2782, 2jl8:A, 2774-2782, 2o43:A, 2707-2715, 2o44:A, 2707-2715, 2o45:A, 2692-2700, 2ogm:0, 2707-2715, 2ogn:0, 2707-2715, 2ogo:0, 2706-2714, 2v47:A, 2690-2698, 2v49:A, 2690-2698, 2zjp:X, 2618-2626, 2zjq:X, 2618-2626, 2zjr:X, 2615-2623, 3cf5:X, 2618-2626, 3dll:X, 2618-2626
AAGACGA
1vs6:B, 2766-2774, 1vs8:B, 2766-2774, 1vsp:w, 2807-2815, 2aw4:B, 2766-2774, 2awb:B, 2766-2774, 2gyc:0, 2657-2665, 2i2t:B, 2766-2774, 2i2v:B, 2766-2774, 2j28:B, 2766-2774, 2qam:B, 2766-2774, 2qao:B, 2766-2774, 2qba:B, 2766-2774, 2qbc:B, 2766-2774, 2qbe:B, 2766-2774, 2qbg:B, 2766-2774, 2qbi:B, 2766-2774, 2qbk:B, 2766-2774, 2qov:B, 2766-2774, 2qox:B, 2766-2774, 2qoz:B, 2766-2774, 2qp1:B, 2766-2774, 2vhm:B, 2766-2774, 2vhn:B, 2766-2774, 2z4l:B, 2766-2774, 2z4n:B, 2766-2774, 3bbx:B, 3049-3057, 3df2:B, 2766-2774, 3df4:B, 2766-2774
AAGACUA
3d5b:A, 2802-2810, 3d5d:A, 2802-2810
UACAAGA
1ffk:0, 2649-2657, 1jj2:0, 2700-2708, 1k73:A, 2700-2708, 1k8a:A, 2700-2708, 1k9m:A, 2700-2708, 1kc8:A, 2700-2708, 1kd1:A, 2700-2708, 1kqs:0, 2700-2708, 1m1k:A, 2700-2708, 1m90:A, 2700-2708, 1nji:A, 2700-2708, 1q82:A, 2700-2708, 1q86:A, 2700-2708, 1qvf:0, 2700-2708, 1qvg:0, 2700-2708, 1s1i:3, 3016-3024, 1s72:0, 2700-2708, 1vq4:0, 2700-2708, 1vq5:0, 2700-2708, 1vq7:0, 2700-2708, 1vqk:0, 2700-2708, 1vql:0, 2700-2708, 1vqm:0, 2700-2708, 1vqo:0, 2700-2708, 1vqp:0, 2700-2708, 1yhq:0, 2700-2708, 1yi2:0, 2700-2708, 1yij:0, 2700-2708, 1yj9:0, 2700-2708, 2go5:9, 12-20, 2otj:0, 2700-2708, 3cc2:0, 2700-2708, 3cc4:0, 2700-2708, 3cce:0, 2700-2708, 3ccu:0, 2700-2708, 3cpw:0, 2700-2708