Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(5-8)-Internal loop cluster 173 (cutoff=1.0 Å with sequence identity)
Cluster size 128 structure(s)
Representative structure 2jl8:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence CGAAA-AGAUAGCU
Cluster members
CGAAA-AGAUAGCU
1j5a:A, 639-777, 1j5a:A, 646-767, 1jzx:A, 639-777, 1jzx:A, 646-767, 1jzy:A, 639-777, 1jzy:A, 646-767, 1jzz:A, 639-777, 1jzz:A, 646-767, 1k01:A, 639-777, 1k01:A, 646-767, 1njm:0, 634-772, 1njm:0, 641-762, 1njn:0, 634-772, 1njn:0, 641-762, 1njo:0, 634-772, 1njo:0, 641-762, 1njp:0, 634-772, 1njp:0, 641-762, 1nkw:0, 634-772, 1nkw:0, 641-762, 1nwx:0, 634-772, 1nwy:0, 634-772, 1ond:0, 634-772, 1ond:0, 641-762, 1p9x:0, 611-749, 1p9x:0, 618-739, 1pnu:0, 634-772, 1pnu:0, 641-762, 1pny:0, 634-772, 1pny:0, 641-762, 1sm1:0, 634-772, 1sm1:0, 641-762, 1vs6:B, 671-809, 1vs6:B, 678-799, 1vs8:B, 671-809, 1vs8:B, 678-799, 1xbp:0, 634-772, 1xbp:0, 641-762, 1y69:0, 634-772, 1y69:0, 641-762, 1yl3:A, 696-834, 1z58:2, 628-766, 2aar:0, 634-772, 2aar:0, 641-762, 2aw4:B, 671-809, 2aw4:B, 678-799, 2awb:B, 671-809, 2awb:B, 678-799, 2d3o:0, 634-772, 2d3o:0, 641-762, 2hgj:A, 696-834, 2hgj:A, 703-824, 2hgq:A, 696-834, 2hgq:A, 703-824, 2hgu:A, 696-834, 2hgu:A, 703-824, 2i2t:B, 671-809, 2i2t:B, 678-799, 2i2v:B, 671-809, 2i2v:B, 678-799, 2j01:A, 680-818, 2j01:A, 687-808, 2j03:A, 680-818, 2j03:A, 687-808, 2j28:B, 671-809, 2j28:B, 678-799, 2jl6:A, 707-845, 2jl6:A, 714-835, 2jl8:A, 707-845, 2jl8:A, 714-835, 2o43:A, 634-772, 2o43:A, 641-762, 2o44:A, 634-772, 2o44:A, 641-762, 2o45:A, 634-772, 2o45:A, 641-762, 2ogm:0, 634-772, 2ogm:0, 641-762, 2ogo:0, 633-771, 2ogo:0, 640-761, 2qam:B, 671-809, 2qam:B, 678-799, 2qao:B, 671-809, 2qao:B, 678-799, 2qba:B, 671-809, 2qba:B, 678-799, 2qbc:B, 671-809, 2qbc:B, 678-799, 2qbe:B, 671-809, 2qbe:B, 678-799, 2qbg:B, 671-809, 2qbg:B, 678-799, 2qbi:B, 671-809, 2qbi:B, 678-799, 2qbk:B, 671-809, 2qbk:B, 678-799, 2qov:B, 671-809, 2qov:B, 678-799, 2qox:B, 671-809, 2qox:B, 678-799, 2qoz:B, 671-809, 2qoz:B, 678-799, 2qp1:B, 671-809, 2qp1:B, 678-799, 2z4l:B, 671-809, 2z4l:B, 678-799, 2z4n:B, 671-809, 2z4n:B, 678-799, 2zjp:X, 612-750, 2zjp:X, 619-740, 2zjq:X, 612-750, 2zjq:X, 619-740, 2zjr:X, 612-750, 2zjr:X, 619-740, 3bbx:B, 671-809, 3bbx:B, 678-799, 3cf5:X, 612-750, 3cf5:X, 619-740, 3d5b:A, 692-830, 3d5b:A, 699-820, 3d5d:A, 692-830, 3d5d:A, 699-820, 3df2:B, 671-809, 3df2:B, 678-799, 3df4:B, 671-809, 3df4:B, 678-799, 3dll:X, 612-750, 3dll:X, 619-740