Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(5-4)-Internal loop cluster 548 (cutoff=1.0 Å with sequence identity)
Cluster size 120 structure(s)
Representative structure 1yhq:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence UAGUA-GAAC
Cluster members
UAGUA-GAAC
1ffk:0, 197-224, 1ffk:0, 207-215, 1jj2:0, 198-225, 1jj2:0, 208-216, 1k73:A, 198-225, 1k73:A, 208-216, 1k8a:A, 198-225, 1k8a:A, 208-216, 1k9m:A, 198-225, 1k9m:A, 208-216, 1kc8:A, 198-225, 1kc8:A, 208-216, 1kd1:A, 198-225, 1kd1:A, 208-216, 1kqs:0, 198-225, 1kqs:0, 208-216, 1m1k:A, 198-225, 1m1k:A, 208-216, 1m90:A, 198-225, 1m90:A, 208-216, 1n8r:A, 198-225, 1n8r:A, 208-216, 1nji:A, 198-225, 1nji:A, 208-216, 1q7y:A, 198-225, 1q7y:A, 208-216, 1q81:A, 198-225, 1q81:A, 208-216, 1q82:A, 198-225, 1q82:A, 208-216, 1q86:A, 198-225, 1q86:A, 208-216, 1qvf:0, 198-225, 1qvf:0, 208-216, 1qvg:0, 198-225, 1qvg:0, 208-216, 1s1i:3, 197-224, 1s1i:3, 207-215, 1s72:0, 198-225, 1s72:0, 208-216, 1vq4:0, 198-225, 1vq4:0, 208-216, 1vq5:0, 198-225, 1vq5:0, 208-216, 1vq6:0, 198-225, 1vq6:0, 208-216, 1vq7:0, 198-225, 1vq7:0, 208-216, 1vq8:0, 198-225, 1vq8:0, 208-216, 1vq9:0, 198-225, 1vq9:0, 208-216, 1vqk:0, 198-225, 1vqk:0, 208-216, 1vql:0, 198-225, 1vql:0, 208-216, 1vqm:0, 198-225, 1vqm:0, 208-216, 1vqn:0, 198-225, 1vqn:0, 208-216, 1vqo:0, 198-225, 1vqo:0, 208-216, 1vqp:0, 198-225, 1vqp:0, 208-216, 1w2b:0, 198-225, 1w2b:0, 208-216, 1yhq:0, 198-225, 1yhq:0, 208-216, 1yi2:0, 198-225, 1yi2:0, 208-216, 1yij:0, 198-225, 1yij:0, 208-216, 1yit:0, 198-225, 1yit:0, 208-216, 1yj9:0, 198-225, 1yj9:0, 208-216, 1yjn:0, 198-225, 1yjn:0, 208-216, 1yjw:0, 198-225, 1yjw:0, 208-216, 2otj:0, 198-225, 2otj:0, 208-216, 2otl:0, 198-225, 2otl:0, 208-216, 2qa4:0, 198-225, 2qa4:0, 208-216, 2qex:0, 198-225, 2qex:0, 208-216, 3cc2:0, 198-225, 3cc2:0, 208-216, 3cc4:0, 198-225, 3cc4:0, 208-216, 3cc7:0, 198-225, 3cc7:0, 208-216, 3cce:0, 198-225, 3cce:0, 208-216, 3ccj:0, 198-225, 3ccj:0, 208-216, 3ccl:0, 198-225, 3ccl:0, 208-216, 3ccm:0, 198-225, 3ccm:0, 208-216, 3ccq:0, 198-225, 3ccq:0, 208-216, 3ccr:0, 198-225, 3ccr:0, 208-216, 3ccs:0, 198-225, 3ccs:0, 208-216, 3ccu:0, 198-225, 3ccu:0, 208-216, 3ccv:0, 198-225, 3ccv:0, 208-216, 3cd6:0, 198-225, 3cd6:0, 208-216, 3cma:0, 198-225, 3cma:0, 208-216, 3cme:0, 198-225, 3cme:0, 208-216, 3cpw:0, 198-225, 3cpw:0, 208-216