Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(4-3)-Internal loop cluster 235 (cutoff=1.0 Å with sequence identity)
Cluster size 80 structure(s)
Representative structure 1vs8:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence GUAA-UGA
Cluster members
GUAA-UGA
1vs6:B, 2793-2817, 1vs6:B, 2799-2812, 1vs8:B, 2793-2817, 1vs8:B, 2799-2812, 1yl3:A, 2819-2845, 1yl3:A, 2826-2839, 2aw4:B, 2793-2817, 2aw4:B, 2799-2812, 2awb:B, 2793-2817, 2awb:B, 2799-2812, 2gya:0, 2684-2708, 2gya:0, 2690-2703, 2gyc:0, 2684-2708, 2gyc:0, 2690-2703, 2hgj:A, 2833-2859, 2hgj:A, 2840-2853, 2hgq:A, 2833-2859, 2hgq:A, 2840-2853, 2hgu:A, 2833-2859, 2hgu:A, 2840-2853, 2i2t:B, 2793-2817, 2i2t:B, 2799-2812, 2i2v:B, 2793-2817, 2i2v:B, 2799-2812, 2j01:A, 2721-2747, 2j01:A, 2728-2741, 2j03:A, 2721-2747, 2j03:A, 2728-2741, 2j28:B, 2793-2817, 2j28:B, 2799-2812, 2jl6:A, 2800-2826, 2jl6:A, 2807-2820, 2jl8:A, 2800-2826, 2jl8:A, 2807-2820, 2qam:B, 2793-2817, 2qam:B, 2799-2812, 2qao:B, 2793-2817, 2qao:B, 2799-2812, 2qba:B, 2793-2817, 2qba:B, 2799-2812, 2qbc:B, 2793-2817, 2qbc:B, 2799-2812, 2qbe:B, 2793-2817, 2qbe:B, 2799-2812, 2qbg:B, 2793-2817, 2qbg:B, 2799-2812, 2qbi:B, 2793-2817, 2qbi:B, 2799-2812, 2qbk:B, 2793-2817, 2qbk:B, 2799-2812, 2qov:B, 2793-2817, 2qov:B, 2799-2812, 2qox:B, 2793-2817, 2qox:B, 2799-2812, 2qoz:B, 2793-2817, 2qoz:B, 2799-2812, 2qp1:B, 2793-2817, 2qp1:B, 2799-2812, 2v47:A, 2716-2742, 2v47:A, 2723-2736, 2v49:A, 2716-2742, 2v49:A, 2723-2736, 2vhm:B, 2793-2817, 2vhm:B, 2799-2812, 2vhn:B, 2793-2817, 2vhn:B, 2799-2812, 2z4l:B, 2793-2817, 2z4l:B, 2799-2812, 2z4n:B, 2793-2817, 2z4n:B, 2799-2812, 3bbx:B, 3076-3100, 3bbx:B, 3082-3095, 3d5b:A, 2828-2854, 3d5b:A, 2835-2848, 3d5d:A, 2828-2854, 3d5d:A, 2835-2848, 3df2:B, 2793-2817, 3df2:B, 2799-2812, 3df4:B, 2793-2817, 3df4:B, 2799-2812