Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(3-3)-Internal loop cluster 2246 (cutoff=2.0 Å)
Cluster size 50 structure(s)
Representative structure 2hgr:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence NNN-NNN
Cluster members
AAA-CUA
1pnu:0, 835-867, 1pnu:0, 842-860
CCC-GCG
1vor:B, 254-328, 1vou:B, 254-328, 1vow:B, 254-328, 1voy:B, 254-328, 1vp0:B, 254-328
CCU-GGG
2v47:B, 79-98, 2v47:B, 84-93, 2v49:B, 79-98, 2v49:B, 84-93
CUA-AAA
1vsa:w, 894-934, 1vsa:w, 905-923, 1vsp:w, 894-934, 1vsp:w, 905-923
GAG-UGA
2hgr:A, 1392-1459
GAU-GUC
1j5a:A, 987-1074, 1jzx:A, 987-1074, 1jzy:A, 987-1074, 1jzz:A, 987-1074, 1k01:A, 987-1074
GAU-UUC
2vhn:B, 869-892, 2vhn:B, 874-887
GCG-CCC
1vor:B, 254-328, 1vou:B, 254-328, 1vow:B, 254-328, 1voy:B, 254-328, 1vp0:B, 254-328
GGA-UCC
1voq:A, 131-222, 1voq:A, 136-217, 1vos:A, 131-222, 1vos:A, 136-217, 1vov:A, 131-222, 1vov:A, 136-217, 1vox:A, 131-222, 1vox:A, 136-217, 1voz:A, 131-222, 1voz:A, 136-217
GGC-GCC
1n36:A, 900-1368
GGG-UCU
1i97:A, 811-833
GUC-GAU
1j5a:A, 987-1074, 1jzx:A, 987-1074, 1jzy:A, 987-1074, 1jzz:A, 987-1074, 1k01:A, 987-1074
UCU-GGG
1i97:A, 811-833
UUC-GAU
2vhn:B, 869-892, 2vhn:B, 874-887
UUU-UCU
1txs:A, 14-27, 1txs:A, 7-34