Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(3-3)-Internal loop cluster 1810 (cutoff=2.0 Å)
Cluster size 47 structure(s)
Representative structure 1yjw:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence MWA-BWN
Cluster members
GUA-CUC
1sm1:0, 2578-2616, 1sm1:0, 2583-2611, 1vor:B, 2620-2662, 1vor:B, 2627-2655, 1vou:B, 2620-2662, 1vou:B, 2627-2655, 1vow:B, 2620-2662, 1vow:B, 2627-2655, 1voy:B, 2620-2662, 1voy:B, 2627-2655, 1vp0:B, 2620-2662, 1vp0:B, 2627-2655
GUA-GUA
3bbo:A, 2623-2665
GUA-GUU
2gyc:0, 2543-2582
GUA-UUC
1vsp:w, 2674-2716, 1vsp:w, 2681-2709, 1yl3:A, 2660-2702, 1yl3:A, 2667-2695
UAA-GAA
1j5a:A, 949-1112, 1j5a:A, 955-1106, 1jzx:A, 949-1112, 1jzx:A, 955-1106, 1jzy:A, 949-1112, 1jzy:A, 955-1106, 1jzz:A, 949-1112, 1jzz:A, 955-1106, 1k01:A, 949-1112, 1k01:A, 955-1106, 1vou:B, 958-1119, 1voy:B, 958-1119, 1vsa:w, 1375-1406, 1vsp:w, 1375-1406, 1yl3:A, 1374-1405, 2b66:A, 1020-1184, 2b9n:A, 1020-1184, 2b9n:A, 1026-1178, 2b9p:A, 1020-1184, 2gya:0, 919-1089, 2gya:0, 929-1079
UAA-GAG
1yjw:0, 1058-1236, 1yjw:0, 1068-1226
UAA-GAU
1vor:B, 1313-1344, 1vou:B, 1313-1344, 1vow:B, 1313-1344, 1voy:B, 1313-1344, 1vp0:B, 1313-1344, 1vsa:w, 1441-1607