Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(3-2)-Internal loop cluster 671 (cutoff=2.0 Å)
Cluster size 52 structure(s)
Representative structure 2qam:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence VNR-DR
Cluster members
AAA-GA
1ull:A, 1-35, 1ull:A, 8-27
ACG-UA
1j5a:A, 1385-1522, 1jzx:A, 1385-1522, 1jzy:A, 1385-1522, 1jzz:A, 1385-1522, 1k01:A, 1385-1522, 1njn:0, 1377-1514, 1y69:0, 1377-1514, 2o43:A, 1377-1514, 2ogo:0, 1376-1513
AGG-UA
1vsp:w, 1454-1589, 2b66:A, 1453-1589, 2b9n:A, 1453-1589, 2b9p:A, 1453-1589, 2hgj:A, 1453-1589, 2hgq:A, 1453-1589, 2hgu:A, 1453-1589
CUG-AA
1vs6:B, 1413-1548, 1vs8:B, 1413-1548, 2aw4:B, 1413-1548, 2awb:B, 1413-1548, 2i2t:B, 1413-1548, 2i2v:B, 1413-1548, 2j28:B, 1413-1548, 2qam:B, 1413-1548, 2qao:B, 1413-1548, 2qba:B, 1413-1548, 2qbc:B, 1413-1548, 2qbe:B, 1413-1548, 2qbg:B, 1413-1548, 2qbi:B, 1413-1548, 2qbk:B, 1413-1548, 2qov:B, 1413-1548, 2qox:B, 1413-1548, 2qoz:B, 1413-1548, 2qp1:B, 1413-1548, 2vhm:B, 1413-1548, 2vhn:B, 1413-1548, 2z4l:B, 1413-1548, 2z4n:B, 1413-1548, 3bbx:B, 1494-1629, 3df2:B, 1413-1548, 3df4:B, 1413-1548
GUA-GG
1ebs:A, 1-29, 1ebs:A, 7-22, 1etg:A, 1-34, 1etg:A, 9-25, 1g70:A, 1-32, 1g70:A, 9-23, 1i9f:A, 1-34, 1i9f:A, 9-25