Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(3-1)-Internal loop cluster 530 (cutoff=2.0 Å)
Cluster size 78 structure(s)
Representative structure 2qam:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence RRR-D
Cluster members
AAA-A
1vs6:B, 281-359, 1vs6:B, 295-343, 1vs8:B, 281-359, 1vs8:B, 295-343, 2aw4:B, 281-359, 2aw4:B, 295-343, 2awb:B, 281-359, 2awb:B, 295-343, 2i2t:B, 281-359, 2i2t:B, 295-343, 2i2v:B, 281-359, 2i2v:B, 295-343, 2j28:B, 281-359, 2j28:B, 295-343, 2qam:B, 281-359, 2qam:B, 295-343, 2qao:B, 281-359, 2qao:B, 295-343, 2qba:B, 281-359, 2qba:B, 295-343, 2qbc:B, 281-359, 2qbc:B, 295-343, 2qbe:B, 281-359, 2qbe:B, 295-343, 2qbg:B, 281-359, 2qbg:B, 295-343, 2qbi:B, 281-359, 2qbi:B, 295-343, 2qbk:B, 281-359, 2qbk:B, 295-343, 2qov:B, 281-359, 2qov:B, 295-343, 2qox:B, 281-359, 2qox:B, 295-343, 2qoz:B, 281-359, 2qoz:B, 295-343, 2qp1:B, 281-359, 2qp1:B, 295-343, 2z4l:B, 281-359, 2z4l:B, 295-343, 2z4n:B, 281-359, 2z4n:B, 295-343, 3bbx:B, 281-359, 3bbx:B, 295-343, 3df2:B, 281-359, 3df2:B, 295-343, 3df4:B, 281-359, 3df4:B, 295-343
AAG-U
1vor:B, 2456-2481, 1vor:B, 2459-2476, 1vou:B, 2456-2481, 1vou:B, 2459-2476, 1vow:B, 2456-2481, 1vow:B, 2459-2476, 1voy:B, 2456-2481, 1voy:B, 2459-2476, 1vp0:B, 2456-2481, 1vp0:B, 2459-2476, 1yl3:A, 2496-2521, 1yl3:A, 2499-2516, 2o43:A, 2412-2437, 2o43:A, 2415-2432
AGG-G
1n8x:A, 1-36, 1n8x:A, 9-26, 1osw:A, 1-22, 1osw:A, 6-15
GAA-A
2j01:A, 303-363, 2j01:A, 308-356, 2j03:A, 303-363, 2j03:A, 308-356, 2jl6:A, 303-363, 2jl6:A, 308-356, 2jl8:A, 303-363, 2jl8:A, 308-356, 3d5b:A, 310-370, 3d5b:A, 315-363, 3d5d:A, 310-370, 3d5d:A, 315-363