Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(2-6)-Internal loop cluster 227 (cutoff=3.0 Å)
Cluster size 56 structure(s)
Representative structure 2qox:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence RA-GHMAWA
Cluster members
AA-GUUAUA
1vs8:B, 76-110, 1vs8:B, 85-97, 2i2t:B, 76-110, 2i2t:B, 85-97, 2i2v:B, 76-110, 2i2v:B, 85-97, 2qam:B, 76-110, 2qam:B, 85-97, 2qao:B, 76-110, 2qao:B, 85-97, 2qba:B, 76-110, 2qba:B, 85-97, 2qbc:B, 76-110, 2qbc:B, 85-97, 2qbg:B, 76-110, 2qbg:B, 85-97, 2qbi:B, 76-110, 2qbi:B, 85-97, 2qbk:B, 76-110, 2qbk:B, 85-97, 2qov:B, 76-110, 2qov:B, 85-97, 2qox:B, 76-110, 2qox:B, 85-97, 2qoz:B, 76-110, 2qoz:B, 85-97, 2qp1:B, 76-110, 2qp1:B, 85-97, 2z4l:B, 76-110, 2z4l:B, 85-97, 2z4n:B, 76-110, 2z4n:B, 85-97, 3bo0:D, 3-27, 3bo0:D, 7-19, 3bo1:D, 3-27, 3bo1:D, 7-19, 3df2:B, 76-110, 3df2:B, 85-97
GA-GAGAAA
1u63:B, 13-33, 1u63:B, 2-48, 1u63:D, 13-33, 1u63:D, 2-48, 2vpl:B, 1-47, 2vpl:B, 12-32, 2vpl:D, 12-33, 2vpl:D, 4-45
GA-GCGAAA
1zho:B, 1-38, 1zho:B, 13-22, 1zho:D, 1-38, 1zho:D, 13-22, 1zho:F, 1-38, 1zho:F, 13-22, 1zho:H, 1-38, 1zho:H, 13-22, 2hw8:B, 1-36, 2hw8:B, 12-21