Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(006)-Hairpin cluster 1426 (cutoff=2.5 Å)
Cluster size 170 structure(s)
Representative structure 3d5b:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence NHNNNN
Cluster members
AAACAA
1c2w:B, 978-985, 1vor:B, 939-946, 1vou:B, 939-946, 1vow:B, 939-946, 1voy:B, 939-946, 1vp0:B, 939-946
AAUCAC
1njm:0, 2102-2109, 1njn:0, 2102-2109, 1njo:0, 2102-2109, 1njp:0, 2102-2109, 1nkw:0, 2102-2109, 1nwx:0, 2102-2109, 1nwy:0, 2102-2109, 1ond:0, 2101-2108, 1pnu:0, 2146-2153, 1pny:0, 2146-2153, 1sm1:0, 2102-2109, 1xbp:0, 2102-2109, 1y69:0, 2102-2109, 2aar:0, 2102-2109, 2d3o:0, 2123-2130, 2o43:A, 2102-2109, 2o45:A, 2090-2097, 2ogm:0, 2102-2109, 2ogn:0, 2102-2109, 2ogo:0, 2101-2108, 2zjq:X, 2013-2020, 2zjr:X, 2010-2017, 3dll:X, 2013-2020
AAUCCA
1c2w:B, 159-166
CUGGGA
1anr:A, 13-20, 2oom:A, 5-12, 2pn9:A, 5-12, 2rn1:A, 5-12
GAAGUA
1c2w:B, 2528-2535
GACACA
1c2w:B, 1612-1619
GACCAC
1j5a:A, 378-385, 1jzx:A, 378-385, 1jzy:A, 378-385, 1jzz:A, 378-385, 1k01:A, 378-385, 1njm:0, 373-380, 1njn:0, 373-380, 1njo:0, 373-380, 1njp:0, 373-380, 1nkw:0, 373-380, 1nwx:0, 373-380, 1nwy:0, 373-380, 1ond:0, 373-380, 1pnu:0, 373-380, 1pny:0, 373-380, 1sm1:0, 373-380, 1vor:B, 373-380, 1vou:B, 373-380, 1vow:B, 373-380, 1voy:B, 373-380, 1vp0:B, 373-380, 1vsa:w, 438-445, 1vsp:w, 438-445, 1xbp:0, 373-380, 1y69:0, 373-380, 1yl3:A, 437-444, 1z58:2, 367-374, 2b66:A, 437-444, 2b9n:A, 437-444, 2b9p:A, 437-444, 2d3o:0, 373-380, 2jl6:A, 426-433, 2jl8:A, 426-433, 2o45:A, 373-380, 2ogn:0, 373-380, 2v47:A, 426-433, 2v49:A, 426-433, 2zjp:X, 351-358, 3bbo:A, 392-399, 3d5b:A, 433-440, 3d5d:A, 433-440
GACCAU
1vs6:B, 410-417, 1vs8:B, 410-417, 2aw4:B, 410-417, 2awb:B, 410-417, 2i2t:B, 410-417, 2i2v:B, 410-417, 2j28:B, 410-417, 2qam:B, 410-417, 2qao:B, 410-417, 2qba:B, 410-417, 2qbc:B, 410-417, 2qbe:B, 410-417, 2qbg:B, 410-417, 2qbi:B, 410-417, 2qbk:B, 410-417, 2qov:B, 410-417, 2qox:B, 410-417, 2qoz:B, 410-417, 2qp1:B, 410-417, 2vhm:B, 410-417, 2vhn:B, 410-417, 2z4l:B, 410-417, 2z4n:B, 410-417, 3bbx:B, 410-417, 3df2:B, 410-417, 3df4:B, 410-417
GAUAAC
1vsa:w, 979-986, 1vsp:w, 979-986, 2hgj:A, 978-985, 2hgu:A, 978-985, 2j01:A, 956-963, 2j03:A, 956-963, 2jl6:A, 983-990, 2jl8:A, 983-990, 2v47:A, 956-963, 2v49:A, 956-963, 3d5b:A, 974-981, 3d5d:A, 974-981
GCAAAG
1j5a:A, 2224-2231, 1jzx:A, 2224-2231, 1jzy:A, 2224-2231, 1jzz:A, 2224-2231, 1k01:A, 2224-2231
GCUAAC
1j5a:A, 908-915, 1jzx:A, 908-915, 1jzy:A, 908-915, 1jzz:A, 908-915, 1k01:A, 908-915, 1nkw:0, 900-907, 1nwx:0, 900-907, 1nwy:0, 900-907, 1p9x:0, 877-884, 1vs6:B, 939-946, 1vs8:B, 939-946, 2aar:0, 900-907, 2aw4:B, 939-946, 2awb:B, 939-946, 2d3o:0, 900-907, 2i2t:B, 939-946, 2i2v:B, 939-946, 2j28:B, 939-946, 2o43:A, 900-907, 2ogm:0, 900-907, 2ogn:0, 900-907, 2ogo:0, 899-906, 2qam:B, 939-946, 2qao:B, 939-946, 2qba:B, 939-946, 2qbc:B, 939-946, 2qbe:B, 939-946, 2qbg:B, 939-946, 2qbi:B, 939-946, 2qbk:B, 939-946, 2qov:B, 939-946, 2qox:B, 939-946, 2qoz:B, 939-946, 2qp1:B, 939-946, 2vhm:B, 939-946, 2vhn:B, 939-946, 2z4l:B, 939-946, 2z4n:B, 939-946, 2zjp:X, 878-885, 2zjq:X, 878-885, 2zjr:X, 875-882, 3bbx:B, 1017-1024, 3cf5:X, 878-885, 3df2:B, 939-946, 3df4:B, 939-946, 3dll:X, 878-885
GUAACA
1c2w:B, 712-719
UCCCAG
1kis:B, 5-12
UCCUGC
3b4a:B, 56-63
UUUUGG
2d3o:0, 2059-2066