Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(017)-Segment cluster 101 (cutoff=1.0 Å)
Cluster size 58 structure(s)
Representative structure 2i2t:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence GCKCRAAGGUYVSCUKA
Cluster members
GCACGAAGGUUGGCUAA
1vs6:B, 2228-2246, 1vs8:B, 2228-2246, 2aw4:B, 2228-2246, 2awb:B, 2228-2246, 2i2t:B, 2228-2246, 2i2v:B, 2228-2246, 2j28:B, 2228-2246, 2qam:B, 2228-2246, 2qao:B, 2228-2246, 2qba:B, 2228-2246, 2qbc:B, 2228-2246, 2qbe:B, 2228-2246, 2qbg:B, 2228-2246, 2qbi:B, 2228-2246, 2qbk:B, 2228-2246, 2qov:B, 2228-2246, 2qox:B, 2228-2246, 2qoz:B, 2228-2246, 2qp1:B, 2228-2246, 2z4l:B, 2228-2246, 2z4n:B, 2228-2246, 3df2:B, 2228-2246, 3df4:B, 2228-2246
GCCCAAAGGUCACCUCA
1njm:0, 2173-2191, 1njn:0, 2173-2191, 1njo:0, 2173-2191, 1njp:0, 2173-2191, 1nkw:0, 2173-2191, 1nwx:0, 2173-2191, 1nwy:0, 2173-2191, 1ond:0, 2172-2190, 1p9x:0, 2148-2166, 1pnu:0, 2217-2235, 1pny:0, 2217-2235, 1sm1:0, 2173-2191, 1xbp:0, 2173-2191, 1y69:0, 2173-2191, 1z58:2, 2152-2170, 2aar:0, 2173-2191, 2d3o:0, 2194-2212, 2o43:A, 2173-2191, 2o45:A, 2161-2179, 2ogm:0, 2173-2191, 2ogn:0, 2173-2191, 2zjp:X, 2084-2102, 2zjq:X, 2084-2102, 2zjr:X, 2081-2099, 3cf5:X, 2084-2102, 3dll:X, 2084-2102
GCCCAAAGGUCCCCUCA
1yl3:A, 2257-2275, 2j01:A, 2159-2177, 2j03:A, 2159-2177, 2jl6:A, 2238-2256, 2jl8:A, 2238-2256, 2v47:A, 2154-2172, 2v49:A, 2154-2172, 3d5b:A, 2266-2284, 3d5d:A, 2266-2284