Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(013)-Segment cluster 357 (cutoff=3.0 Å)
Cluster size 101 structure(s)
Representative structure 2qex:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence VSWYRAVBSVWVB
Cluster members
ACUCAAAUCCACC
1ffk:0, 1163-1177, 1jj2:0, 1210-1224, 1k73:A, 1210-1224, 1k8a:A, 1210-1224, 1k9m:A, 1210-1224, 1kc8:A, 1210-1224, 1kd1:A, 1210-1224, 1kqs:0, 1210-1224, 1m1k:A, 1210-1224, 1m90:A, 1210-1224, 1n8r:A, 1210-1224, 1nji:A, 1210-1224, 1q7y:A, 1210-1224, 1q81:A, 1210-1224, 1q82:A, 1210-1224, 1q86:A, 1210-1224, 1qvf:0, 1210-1224, 1qvg:0, 1210-1224, 1s1i:3, 1315-1329, 1s72:0, 1210-1224, 1vq4:0, 1210-1224, 1vq5:0, 1210-1224, 1vq6:0, 1210-1224, 1vq7:0, 1210-1224, 1vq8:0, 1210-1224, 1vq9:0, 1210-1224, 1vqk:0, 1210-1224, 1vql:0, 1210-1224, 1vqm:0, 1210-1224, 1vqn:0, 1210-1224, 1vqo:0, 1210-1224, 1vqp:0, 1210-1224, 1w2b:0, 1210-1224, 1yhq:0, 1210-1224, 1yi2:0, 1210-1224, 1yij:0, 1210-1224, 1yit:0, 1210-1224, 1yj9:0, 1210-1224, 1yjn:0, 1210-1224, 1yjw:0, 1210-1224, 2otj:0, 1210-1224, 2otl:0, 1210-1224, 2qa4:0, 1215-1229, 2qex:0, 1210-1224, 3cc2:0, 1210-1224, 3cc4:0, 1210-1224, 3cc7:0, 1210-1224, 3cce:0, 1210-1224, 3ccj:0, 1210-1224, 3ccl:0, 1210-1224, 3ccm:0, 1210-1224, 3ccq:0, 1210-1224, 3ccr:0, 1210-1224, 3ccs:0, 1210-1224, 3ccu:0, 1210-1224, 3ccv:0, 1210-1224, 3cd6:0, 1210-1224, 3cma:0, 1210-1224, 3cme:0, 1210-1224, 3cpw:0, 1210-1224
CGACGACGGGUAG
1fka:A, 267-281
GCUCAAGCCCAGC
1vsa:w, 1162-1176, 1vsp:w, 1162-1176
GCUCAAGUGAUCU
1j5a:A, 1090-1104, 1jzx:A, 1090-1104, 1jzy:A, 1090-1104, 1jzz:A, 1090-1104, 1k01:A, 1090-1104, 1njm:0, 1082-1096, 1njn:0, 1082-1096, 1njo:0, 1082-1096, 1njp:0, 1082-1096, 1nkw:0, 1082-1096, 1nwx:0, 1082-1096, 1nwy:0, 1082-1096, 1ond:0, 1082-1096, 1pnu:0, 1098-1112, 1pny:0, 1098-1112, 1sm1:0, 1082-1096, 1xbp:0, 1082-1096, 1y69:0, 1082-1096, 1z58:2, 1073-1087, 2aar:0, 1082-1096, 2d3o:0, 1082-1096, 2o43:A, 1082-1096, 2o45:A, 1079-1093, 2ogm:0, 1082-1096, 2ogn:0, 1082-1096, 2ogo:0, 1081-1095, 2zjp:X, 1060-1074, 2zjq:X, 1060-1074, 2zjr:X, 1057-1071, 3cf5:X, 1060-1074, 3dll:X, 1060-1074
GCUUAAGCCCAGC
2j01:A, 1087-1101, 2j03:A, 1087-1101, 2jl6:A, 1166-1180, 2jl8:A, 1166-1180, 2v47:A, 1087-1101, 3d5b:A, 1157-1171, 3d5d:A, 1157-1171