Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(008)-Segment cluster 309 (cutoff=3.0 Å)
Cluster size 48 structure(s)
Representative structure 1s1i:3 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence DNNVNNNN
Cluster members
AGCCCUAG
2f4v:A, 1012-1021
GAACCGGU
2b66:A, 757-766, 2b9n:A, 757-766, 2b9p:A, 757-766
GAUAACAG
1j5a:A, 2346-2355, 1jzx:A, 2346-2355, 1jzy:A, 2346-2355, 1jzz:A, 2346-2355, 1k01:A, 2346-2355, 1k9m:A, 2344-2353, 1njm:0, 2338-2347, 1njn:0, 2338-2347, 1njo:0, 2338-2347, 1njp:0, 2338-2347, 1nkw:0, 2338-2347, 1nwx:0, 2338-2347, 1ond:0, 2337-2346, 1p9x:0, 2313-2322, 1pnu:0, 2382-2391, 1pny:0, 2382-2391, 1q7y:A, 2344-2353, 1qvg:0, 2344-2353, 1s1i:3, 2661-2670, 1xbp:0, 2338-2347, 1y69:0, 2338-2347, 1z58:2, 2317-2326, 2hgj:A, 2436-2445, 2hgq:A, 2436-2445, 2hgu:A, 2436-2445, 2o45:A, 2326-2335, 2qa4:0, 2349-2358, 2qbi:B, 2393-2402, 2qbk:B, 2393-2402, 2vhm:B, 2393-2402, 2vhn:B, 2393-2402, 2zjq:X, 2249-2258
GUGAGACA
2vho:A, 1034-1043
GUUGCCUC
2qa4:9, 21-30, 3ccr:9, 21-30, 3ccs:9, 21-30
UCACGCCA
1hnz:A, 1383-1392
UGACUGGG
1fka:A, 1433-1442
UUACUGCA
2hgj:A, 2074-2083, 2hgq:A, 2074-2083
UUCAGAAC
1j5a:A, 2483-2492, 1jzx:A, 2483-2492, 1jzy:A, 2483-2492, 1jzz:A, 2483-2492