Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(007)-Segment cluster 1144 (cutoff=1.5 Å)
Cluster size 129 structure(s)
Representative structure 2qbk:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence SWSGUAY
Cluster members
CUCGUAC
1ffk:0, 1790-1798, 1jj2:0, 1840-1848, 1k73:A, 1840-1848, 1k8a:A, 1840-1848, 1k9m:A, 1840-1848, 1kc8:A, 1840-1848, 1kd1:A, 1840-1848, 1kqs:0, 1840-1848, 1m1k:A, 1840-1848, 1m90:A, 1840-1848, 1n8r:A, 1840-1848, 1nji:A, 1840-1848, 1q7y:A, 1840-1848, 1q81:A, 1840-1848, 1q82:A, 1840-1848, 1q86:A, 1840-1848, 1qvf:0, 1840-1848, 1qvg:0, 1840-1848, 1s1i:3, 1948-1956, 1s72:0, 1840-1848, 1vq4:0, 1840-1848, 1vq5:0, 1840-1848, 1vq6:0, 1840-1848, 1vq7:0, 1840-1848, 1vq8:0, 1840-1848, 1vq9:0, 1840-1848, 1vqk:0, 1840-1848, 1vql:0, 1840-1848, 1vqm:0, 1840-1848, 1vqn:0, 1840-1848, 1vqo:0, 1840-1848, 1vqp:0, 1840-1848, 1w2b:0, 1840-1848, 1yhq:0, 1840-1848, 1yi2:0, 1840-1848, 1yij:0, 1840-1848, 1yit:0, 1840-1848, 1yj9:0, 1840-1848, 1yjn:0, 1840-1848, 1yjw:0, 1840-1848, 2otj:0, 1840-1848, 2otl:0, 1840-1848, 2qa4:0, 1845-1853, 2qex:0, 1840-1848, 3cc2:0, 1840-1848, 3cc4:0, 1840-1848, 3cc7:0, 1840-1848, 3cce:0, 1840-1848, 3ccj:0, 1840-1848, 3ccl:0, 1840-1848, 3ccm:0, 1840-1848, 3ccq:0, 1840-1848, 3ccr:0, 1840-1848, 3ccs:0, 1840-1848, 3ccu:0, 1840-1848, 3ccv:0, 1840-1848, 3cd6:0, 1840-1848, 3cma:0, 1840-1848, 3cme:0, 1840-1848, 3cpw:0, 1840-1848
GACGUAU
1njm:0, 1739-1747, 1njn:0, 1739-1747, 1njo:0, 1739-1747, 1njp:0, 1739-1747, 1nkw:0, 1739-1747, 1nwx:0, 1739-1747, 1nwy:0, 1739-1747, 1ond:0, 1738-1746, 1p9x:0, 1714-1722, 1pnu:0, 1755-1763, 1pny:0, 1755-1763, 1sm1:0, 1739-1747, 1vor:B, 1755-1763, 1vou:B, 1755-1763, 1vow:B, 1755-1763, 1voy:B, 1755-1763, 1vp0:B, 1755-1763, 1vs6:B, 1797-1805, 1vs8:B, 1797-1805, 1xbp:0, 1739-1747, 2aar:0, 1739-1747, 2aw4:B, 1797-1805, 2awb:B, 1797-1805, 2d3o:0, 1739-1747, 2gya:0, 1711-1719, 2i2t:B, 1797-1805, 2i2v:B, 1797-1805, 2j28:B, 1797-1805, 2o43:A, 1739-1747, 2o45:A, 1736-1744, 2ogm:0, 1739-1747, 2ogn:0, 1739-1747, 2ogo:0, 1738-1746, 2qam:B, 1797-1805, 2qao:B, 1797-1805, 2qba:B, 1797-1805, 2qbc:B, 1797-1805, 2qbe:B, 1797-1805, 2qbg:B, 1797-1805, 2qbi:B, 1797-1805, 2qbk:B, 1797-1805, 2qov:B, 1797-1805, 2qox:B, 1797-1805, 2qoz:B, 1797-1805, 2qp1:B, 1797-1805, 2z4l:B, 1797-1805, 2z4n:B, 1797-1805, 2zjp:X, 1717-1725, 2zjq:X, 1717-1725, 2zjr:X, 1714-1722, 3bbx:B, 1887-1895, 3cf5:X, 1717-1725, 3df2:B, 1797-1805, 3df4:B, 1797-1805, 3dll:X, 1717-1725
GAGGUAU
1vsa:w, 1822-1830, 1vsp:w, 1822-1830, 1yl3:A, 1822-1830, 2hgj:A, 1822-1830, 2hgq:A, 1822-1830, 2hgu:A, 1822-1830, 2j01:A, 1739-1747, 2j03:A, 1739-1747, 2jl6:A, 1818-1826, 2jl8:A, 1818-1826, 2v47:A, 1739-1747, 2v49:A, 1739-1747, 3d5b:A, 1817-1825, 3d5d:A, 1817-1825