Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(006)-Segment cluster 972 (cutoff=3.0 Å)
Cluster size 132 structure(s)
Representative structure 1vqk:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence DDWBVH
Cluster members
AUUCCU
1r7z:A, 7-14
GAAUAA
1ffk:0, 396-403, 1jj2:0, 397-404, 1k73:A, 397-404, 1k8a:A, 397-404, 1k9m:A, 397-404, 1kc8:A, 397-404, 1kd1:A, 397-404, 1kqs:0, 397-404, 1m1k:A, 397-404, 1m90:A, 397-404, 1n8r:A, 397-404, 1nji:A, 397-404, 1q7y:A, 397-404, 1q81:A, 397-404, 1q82:A, 397-404, 1q86:A, 397-404, 1qvf:0, 397-404, 1qvg:0, 397-404, 1s1i:3, 396-403, 1s72:0, 397-404, 1vq4:0, 397-404, 1vq5:0, 397-404, 1vq6:0, 397-404, 1vq7:0, 397-404, 1vq8:0, 397-404, 1vq9:0, 397-404, 1vqk:0, 397-404, 1vql:0, 397-404, 1vqm:0, 397-404, 1vqn:0, 397-404, 1vqo:0, 397-404, 1vqp:0, 397-404, 1w2b:0, 397-404, 1yhq:0, 397-404, 1yi2:0, 397-404, 1yij:0, 397-404, 1yit:0, 397-404, 1yj9:0, 397-404, 1yjn:0, 397-404, 1yjw:0, 397-404, 2otj:0, 397-404, 2otl:0, 397-404, 2qa4:0, 397-404, 2qex:0, 397-404, 3cc2:0, 397-404, 3cc4:0, 397-404, 3cc7:0, 397-404, 3cce:0, 397-404, 3ccj:0, 397-404, 3ccl:0, 397-404, 3ccm:0, 397-404, 3ccq:0, 397-404, 3ccr:0, 397-404, 3ccs:0, 397-404, 3ccu:0, 397-404, 3ccv:0, 397-404, 3cd6:0, 397-404, 3cma:0, 397-404, 3cme:0, 397-404, 3cpw:0, 397-404
GAAUAU
1vs6:B, 399-406, 1vs8:B, 399-406, 2aw4:B, 399-406, 2awb:B, 399-406, 2gya:0, 343-350, 2gyc:0, 343-350, 2i2t:B, 399-406, 2i2v:B, 399-406, 2j28:B, 399-406, 2qam:B, 399-406, 2qao:B, 399-406, 2qba:B, 399-406, 2qbc:B, 399-406, 2qbe:B, 399-406, 2qbg:B, 399-406, 2qbi:B, 399-406, 2qbk:B, 399-406, 2qov:B, 399-406, 2qox:B, 399-406, 2qoz:B, 399-406, 2qp1:B, 399-406, 2z4l:B, 399-406, 2z4n:B, 399-406, 3bbx:B, 399-406, 3df2:B, 399-406, 3df4:B, 399-406
GAAUCC
1j5a:A, 367-374, 1jzx:A, 367-374, 1jzy:A, 367-374, 1jzz:A, 367-374, 1k01:A, 367-374, 1njm:0, 362-369, 1njn:0, 362-369, 1njo:0, 362-369, 1njp:0, 362-369, 1nkw:0, 362-369, 1nwx:0, 362-369, 1nwy:0, 362-369, 1ond:0, 362-369, 1sm1:0, 362-369, 1xbp:0, 362-369, 2aar:0, 362-369, 2o45:A, 362-369, 2ogm:0, 362-369, 2ogo:0, 361-368, 2zjp:X, 340-347, 2zjq:X, 340-347, 2zjr:X, 340-347, 3cf5:X, 340-347, 3dll:X, 340-347
GAAUCU
1vsa:w, 427-434, 1vsp:w, 427-434, 2b66:A, 426-433, 2b9n:A, 426-433, 2b9p:A, 426-433, 2hgj:A, 426-433, 2hgq:A, 426-433, 2hgu:A, 426-433, 2j01:A, 415-422, 2j03:A, 415-422, 2jl6:A, 415-422, 2jl8:A, 415-422, 2v47:A, 415-422, 2v49:A, 415-422, 3d5b:A, 422-429, 3d5d:A, 422-429
GGUCGU
1vsa:w, 283-290, 1vsp:w, 283-290, 3d5b:A, 278-285, 3d5d:A, 278-285
UUUGAA
1c2w:B, 2129-2136