Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(006)-Segment cluster 2707 (cutoff=1.5 Å)
Cluster size 119 structure(s)
Representative structure 3ccl:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence HYCGUA
Cluster members
AUCGUA
1vs6:B, 1581-1588, 1vs8:B, 1581-1588, 2aw4:B, 1581-1588, 2awb:B, 1581-1588, 2gya:0, 1518-1525, 2gyc:0, 1518-1525, 2i2t:B, 1581-1588, 2i2v:B, 1581-1588, 2j28:B, 1581-1588, 2qam:B, 1581-1588, 2qao:B, 1581-1588, 2qba:B, 1581-1588, 2qbc:B, 1581-1588, 2qbe:B, 1581-1588, 2qbg:B, 1581-1588, 2qbi:B, 1581-1588, 2qbk:B, 1581-1588, 2qov:B, 1581-1588, 2qox:B, 1581-1588, 2qoz:B, 1581-1588, 2qp1:B, 1581-1588, 2vhm:B, 1581-1588, 2vhn:B, 1581-1588, 2z4l:B, 1581-1588, 2z4n:B, 1581-1588, 3df2:B, 1581-1588, 3df4:B, 1581-1588
CCCGUA
1p9x:0, 1523-1530, 1sm1:0, 1547-1554, 1vor:B, 1563-1570, 1vou:B, 1563-1570, 1voy:B, 1563-1570, 1vp0:B, 1563-1570, 1vsa:w, 1621-1628, 1vsp:w, 1621-1628, 1xbp:0, 1547-1554, 1y69:0, 1547-1554, 2aar:0, 1547-1554, 2b66:A, 1621-1628, 2b9n:A, 1621-1628, 2b9p:A, 1621-1628, 2d3o:0, 1547-1554, 2j01:A, 1538-1545, 2j03:A, 1538-1545, 2jl6:A, 1617-1624, 2jl8:A, 1617-1624, 2o43:A, 1547-1554, 2o44:A, 1547-1554, 2o45:A, 1544-1551, 2ogm:0, 1547-1554, 2v47:A, 1538-1545, 2v49:A, 1538-1545, 2zjp:X, 1525-1532, 2zjq:X, 1525-1532, 2zjr:X, 1522-1529, 3cf5:X, 1525-1532, 3d5b:A, 1616-1623, 3d5d:A, 1616-1623, 3dll:X, 1525-1532
UCCGUA
1ffk:0, 1593-1600, 1jj2:0, 1643-1650, 1k73:A, 1643-1650, 1k8a:A, 1643-1650, 1k9m:A, 1643-1650, 1kc8:A, 1643-1650, 1kd1:A, 1643-1650, 1kqs:0, 1643-1650, 1m1k:A, 1643-1650, 1m90:A, 1643-1650, 1n8r:A, 1643-1650, 1nji:A, 1643-1650, 1q7y:A, 1643-1650, 1q81:A, 1643-1650, 1q82:A, 1643-1650, 1q86:A, 1643-1650, 1qvf:0, 1643-1650, 1qvg:0, 1643-1650, 1s1i:3, 1751-1758, 1s72:0, 1643-1650, 1vq4:0, 1643-1650, 1vq5:0, 1643-1650, 1vq6:0, 1643-1650, 1vq7:0, 1643-1650, 1vq8:0, 1643-1650, 1vq9:0, 1643-1650, 1vqk:0, 1643-1650, 1vql:0, 1643-1650, 1vqm:0, 1643-1650, 1vqn:0, 1643-1650, 1vqo:0, 1643-1650, 1vqp:0, 1643-1650, 1w2b:0, 1643-1650, 1yhq:0, 1643-1650, 1yi2:0, 1643-1650, 1yij:0, 1643-1650, 1yit:0, 1643-1650, 1yj9:0, 1643-1650, 1yjn:0, 1643-1650, 1yjw:0, 1643-1650, 2otj:0, 1643-1650, 2otl:0, 1643-1650, 2qa4:0, 1648-1655, 2qex:0, 1643-1650, 3cc2:0, 1643-1650, 3cc4:0, 1643-1650, 3cc7:0, 1643-1650, 3cce:0, 1643-1650, 3ccj:0, 1643-1650, 3ccl:0, 1643-1650, 3ccm:0, 1643-1650, 3ccq:0, 1643-1650, 3ccr:0, 1643-1650, 3ccs:0, 1643-1650, 3ccu:0, 1643-1650, 3ccv:0, 1643-1650, 3cd6:0, 1643-1650, 3cma:0, 1643-1650, 3cme:0, 1643-1650, 3cpw:0, 1643-1650