Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(005)-Segment cluster 4110 (cutoff=2.5 Å)
Cluster size 78 structure(s)
Representative structure 3d5d:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence MHNHR
Cluster members
GCAAA
1vs6:B, 1782-1788, 1vs8:B, 1782-1788, 2aw4:B, 1782-1788, 2awb:B, 1782-1788, 2gya:0, 1696-1702, 2i2t:B, 1782-1788, 2i2v:B, 1782-1788, 2j28:B, 1782-1788, 2qam:B, 1782-1788, 2qao:B, 1782-1788, 2qba:B, 1782-1788, 2qbc:B, 1782-1788, 2qbe:B, 1782-1788, 2qbg:B, 1782-1788, 2qbi:B, 1782-1788, 2qbk:B, 1782-1788, 2qov:B, 1782-1788, 2qox:B, 1782-1788, 2qoz:B, 1782-1788, 2qp1:B, 1782-1788, 2z4l:B, 1782-1788, 2z4n:B, 1782-1788, 3bbx:B, 1872-1878, 3df2:B, 1782-1788, 3df4:B, 1782-1788
GCCAA
1njm:0, 1723-1729, 1njn:0, 1723-1729, 1njo:0, 1723-1729, 1njp:0, 1723-1729, 1nkw:0, 1723-1729, 1nwx:0, 1723-1729, 1nwy:0, 1723-1729, 1ond:0, 1722-1728, 1p9x:0, 1698-1704, 1pnu:0, 1739-1745, 1pny:0, 1739-1745, 1sm1:0, 1723-1729, 1vor:B, 1739-1745, 1vou:B, 1739-1745, 1vow:B, 1739-1745, 1voy:B, 1739-1745, 1vp0:B, 1739-1745, 1xbp:0, 1723-1729, 2aar:0, 1723-1729, 2d3o:0, 1723-1729, 2o43:A, 1723-1729, 2o45:A, 1720-1726, 2ogm:0, 1723-1729, 2ogn:0, 1723-1729, 2ogo:0, 1722-1728, 2zjp:X, 1701-1707, 2zjq:X, 1701-1707, 2zjr:X, 1698-1704, 3cf5:X, 1701-1707, 3dll:X, 1701-1707
GCGAA
1vsa:w, 1807-1813, 1vsp:w, 1807-1813, 1yl3:A, 1807-1813, 2hgj:A, 1807-1813, 2hgq:A, 1807-1813, 2hgu:A, 1807-1813, 2j01:A, 1724-1730, 2j03:A, 1724-1730, 2jl6:A, 1803-1809, 2jl8:A, 1803-1809, 2v47:A, 1724-1730, 2v49:A, 1724-1730, 3d5b:A, 1802-1808, 3d5d:A, 1802-1808
GUUAG
3cul:D, 50-56, 3cun:C, 50-56
UAGUA
2hgp:A, 1321-1327, 2hgr:A, 1321-1327
UAUCA
2gdi:X, 42-48, 2gdi:Y, 42-48, 2hoj:A, 42-48, 2hol:A, 42-48, 2hom:A, 43-49